Program for stream OR in Life Sciences

MA-32: OR for Disease Treatment
Stream: OR in Life Sciences
Room: G109
Chair(s): Tomasz Żok

• Improving Medical Decision-Making with a Management Science Game Theory Approach to Liver Transplantation
  José Rui Figueira, Francisco Mendonça, Margarida Catalão-Lopes, Rui Tato Marinho
• A Stochastic Petri Net-Based Model of the Involvement of Interleukin 18 in Atherosclerosis
  Agnieszka Rybarczyk, Dorota Formanowicz, Marcin Radom, Piotr Formanowicz
• MINERVA API and Plugin Architecture: New Data Visualization Interfaces for Disease Maps
  Piotr Gawron, Marek Ostaszewski, David Hoksza, Reinhard Schneider

MB-32: Algorithms for Sequencing and Assembly
Stream: OR in Life Sciences
Room: G109
Chair(s): Aleksandra Swiercz

• Using GRASShopPER De Novo Assembler with Reduced Overlap Graph
  Wojciech Frohmberg, Aleksandra Swiercz, Michal Kierzynka, Pawel Wojciechowski, Artur Laskowski, Jan Badura, Piotr Zurkowski, Marta Kasprzak, Jacek Blazewicz
• De Novo Assembler. Novel Overlap Graph Construction
  Artur Laskowski, Aleksandra Swiercz, Wojciech Frohmberg, Jan Badura, Pawel Wojciechowski, Marta Kasprzak, Jacek Blazewicz
• Classifying Sequencing Data Using Linear Programming
  María J. Nueda, Mariola D. Molina Vila, Carmen Gandia Tortosa
• Simulation of RNA Sequence Evolution in the RNA World
  Jarosław Synak, Agnieszka Rybarczyk, Jacek Blazewicz

MC-32: Biological Data Analysis
Stream: OR in Life Sciences
Room: G109
Chair(s): Pawel Wojciechowski

• Detection of Hidden Patterns in Time Series Data via Multiple-time FOD Method
  Ekin Can Erkuş, Vilda Purutcuoglu
• Integrated Data Analysis of Gene Expression and Structural Variation Data of A. Thaliana
  Aleksandra Swiercz, Giovanni Felici, Agnieszka Zmienko
• Population Scale Analysis of Copy Number Variations in Arabidopsis Thaliana
  Pawel Wojciechowski, Agnieszka Zmienko, Malgorzata Marszalek-Zenczak

MD-32: Structural Bioinformatics
Stream: OR in Life Sciences
Room: G109
Chair(s): Agnieszka Rybarczyk

• Web-Based Integrated Sequence and Structure Visualization
  David Hoksza, Marek Ostaszewski, Piotr Gawron, Ewa Smula, Reinhard Schneider
• Ab Initio Evaluation of 3D Structural Model of Protein/RNA Molecule
  Piotr Lukasiak, Tomasz Ratajczak, Thomas Villmann
• Probabilistic Sampling of RNA 3D Conformational Space
  Tomasz Żok

TA-32: Biological Networks
Stream: OR in Life Sciences
Room: G109
Chair(s): Vilda Purutcuoglu, Harshita Kajaria, Lidia Betcheva

• Investigation of the OWL-based Biomedical Ontology with the Social Network Analysis
  Martina Husáková
• Novel Magnetic Coils placement and Setting Schemes in Micro/NanoBots Networks
  Hong-Hsu Yen
• Which stage of the industry lifecycle do Clinical Research Organizations (CROs) currently reside in? An exploratory analysis using clinical trials data
  Lidia Betcheva, Feryal Erhun
• Novel Model Selection Approaches for LMARS in the Construction of Biological Networks
  Gül Bahar BULBUL, Vilda Purutcuoglu